BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006A01SP1|AL425452
(839 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1446 1558 0.0
3x_Contig1715 146 9e-35
3x_Contig1731 144 3e-34
>3x_Contig1446
Length = 10598
Score = 1558 bits (781), Expect = 0.0
Identities = 829/844 (98%), Gaps = 6/844 (0%)
Strand = Plus / Plus
Query: 1 atcatcaaatgattaattatcagttcgtacaaattttagttggtgtgttctcaaaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9385 atcatcaaatgattaattatcagttcgtacaaattttagttggtgtgttctcaaaagttc 9444
Query: 61 tcaccttcgaagcattttcccccttattttggatctaaatactctttagactatctctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9445 tcaccttcgaagcattttcccccttattttggatctaaatactctttagactatctctgt 9504
Query: 121 acattatttaaacataaagtttcaaaagtaagtkttacatttatatttcataccatcttt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9505 acattatttaaacataaagtttcaaaagtaagttttacatttatatttcataccatcttt 9564
Query: 181 accgtgaacctcttattgtgaggtgcgatgatctggtgtcgtttaaaagattatgagtka 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9565 accgtgaacctcttattgtgaggtgcgatgatctggtgtcgtttaaaagattatgagtta 9624
Query: 241 tataatattgacaagatcgagtttaaagttgaaaaaacccaaaaaaagtttcagctcgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9625 tataatattgacaagatcgagtttaaagttgaaaaaacccaaaaaaagtttcagctcgca 9684
Query: 301 ctcaggatcgaactaaggaccaacagatttgcaatctgctgcgctaccactgcgccatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9685 ctcaggatcgaactaaggaccaacagatttgcaatctgctgcgctaccactgcgccatac 9744
Query: 361 gagcaaaactagtactaacttaagtkagaaggtaatacttataccagaratatgatcggg 420
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 9745 gagcaaaactagtactaacttaagttagaaggtaatacttataccagaaatatgatcggg 9804
Query: 421 ttatgtatatttkttta-tattgta--ttaacccaatctatgtgatgaatggragacctt 477
|||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||
Sbjct: 9805 ttatgtatatttttttactattgtactataacccaatctatgtgatgaatggaagacctt 9864
Query: 478 tagaaaggcgaaacacaatgtacaaagacatactaataagcgtattaactaacaatattg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9865 tagaaaggcgaaacacaatgtacaaagacatactaataagcgtattaactaacaatattg 9924
Query: 538 aaagattgatgagattctaggagaaatattatatagattagaagctgctgttgtataccg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9925 aaagattgatgagattctaggagaaatattatatagattagaagctgctgttgtataccg 9984
Query: 598 tgaagtgaacagaaaagaaatataactgggaacgcgatgacgatgaaacaggtgtagaaa 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9985 tgaagtgaacagaaaagaaatataactgggaacgcgatgacgatgaaacaggtgtagaaa 10044
Query: 658 ttgttgattgcatccaataatcccttgaaggactctgctctaatccttttcagttcaaga 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10045 ttgttgattgcatccaataatcccttgaaggactctgctctaatccttttcagttcaaga 10104
Query: 718 atgcgtagtctacaattcacttcaatggtatcattagagtgcatggrgg-cacacctgaa 776
||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||
Sbjct: 10105 atgcgtagtctacaattcacttc-atggtatcattagagtgcatggaggccacacctgaa 10163
Query: 777 tgaatttctagtttaatgcaagtcaatcaatgc-ycgacttgtacctgttattcttcctc 835
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10164 tgaatttctagtttaatgcaagtcaatcaatgctccgacttgtacctgttattcttcctc 10223
Query: 836 gttt 839
||||
Sbjct: 10224 gttt 10227
>3x_Contig1715
Length = 16241
Score = 146 bits (73), Expect = 9e-35
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 292 cagctcgcactcaggatcgaactaaggaccaacagatttgcaatctgctgcgctaccact 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12685 cagctcgcactcaggatcgaactaaggaccaacagatttgcaatctgctgcgctaccact 12744
Query: 352 gcgccatacgagc 364
|||||||||||||
Sbjct: 12745 gcgccatacgagc 12757
>3x_Contig1731
Length = 24233
Score = 144 bits (72), Expect = 3e-34
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 293 agctcgcactcaggatcgaactaaggaccaacagatttgcaatctgctgcgctaccactg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 agctcgcactcaggatcgaactaaggaccaacagatttgcaatctgctgcgctaccactg 376
Query: 353 cgccatacgagc 364
||||||||||||
Sbjct: 375 cgccatacgagc 364
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6384
Number of Sequences: 1807
Number of extensions: 6384
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 3
length of query: 839
length of database: 10,358,551
effective HSP length: 16
effective length of query: 823
effective length of database: 10,329,639
effective search space: 8501292897
effective search space used: 8501292897
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)